MIRU-VNTRplus: Identification by Similarity Search
Settings
Distance Measure: MIRU-VNTR [24]: Categorical (1), Spoligo: Categorical (1), RD: Categorical (1)
Number of user strains per page:
10
For each user-strain, display the next 5 matches.
Do not show strains with distance greater than 0.17
Summary Statistics
Number of user strains: 0
Clustering Rate
Clustering rate MIRU: NaN
Clustering rate Spoligo: NaN
Allelic Diversity
| 154 / MIRU02: 0.0 | | 960 / MIRU10: 0.0 | | 2165 / ETRA: 0.0 | | 2687 / MIRU24: 0.0 | | 3690 / Mtub39: 0.0 |
| 424 / Mtub04: 0.0 | | 1644 / MIRU16: 0.0 | | 2347 / Mtub29: 0.0 | | 2996 / MIRU26: 0.0 | | 4052 / QUB26: 0.0 |
| 577 / ETRC: 0.0 | | 1955 / Mtub21: 0.0 | | 2401 / Mtub30: 0.0 | | 3007 / MIRU27: 0.0 | | 4156 / QUB4156: 0.0 |
| 580 / MIRU04: 0.0 | | 2059 / MIRU20: 0.0 | | 2461 / ETRB: 0.0 | | 3171 / Mtub34: 0.0 | | 4348 / MIRU39: 0.0 |
| 802 / MIRU40: 0.0 | | 2163b / QUB11b: 0.0 | | 2531 / MIRU23: 0.0 | | 3192 / MIRU31: 0.0 | |
Distribution of Identified Lineages